Platform for Drug Discovery



BWA(PE)+GE


Introduction


    Map short reads to reference genome by using BWA, and the result is visualized by Genome Explorer(GE) on the web.



    Input formatFASTQ(Illumina, IonTorrent, etc...)
    Library layoutFor single-end read only
    SpeciesHuman(hg19,hg18),Mouse(mm9,mm10),Rat(rn4),Chicken(galGal3,galGal4),Yeast(sacCer2), Macaque(rheMac2), Arabidopsis(tair10)
    Execution timeAbout 5 hours. (80M paired-end reads[50bp+50bp])


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