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HOMERインストールログ

Homerのインストール:
$ cd install_path/
$ mkdir HOMER_v4.7
$ cd HOMER_v4.7/
$ wget http://homer.salk.edu/homer/configureHomer.pl
$ perl configureHomer.pl -install

以下は、HOMERで用いるデータのインストール
$ cd install_path/HOMER_v4.7/
$ export PATH=${PATH}:install_path/HOMER_v4.7/bin
# Human
$ perl install_path/HOMER_v4.7/configureHomer.pl -install hg38
$ perl install_path/HOMER_v4.7/configureHomer.pl -install hg19
$ perl install_path/HOMER_v4.7/configureHomer.pl -install human-p
# Mouse
$ perl install_path/HOMER_v4.7/configureHomer.pl -install mm10
$ perl install_path/HOMER_v4.7/configureHomer.pl -install mm9
$ perl install_path/HOMER_v4.7/configureHomer.pl -install mouse-p
# Rat
$ perl install_path/HOMER_v4.7/configureHomer.pl -install rn5
$ perl install_path/HOMER_v4.7/configureHomer.pl -install rn4
$ perl install_path/HOMER_v4.7/configureHomer.pl -install rat-p
# Chicken
$ perl install_path/HOMER_v4.7/configureHomer.pl -install galGal4
$ perl install_path/HOMER_v4.7/configureHomer.pl -install chicken-p
# Arabidopsis
$ perl install_path/HOMER_v4.7/configureHomer.pl -install tair10
$ perl install_path/HOMER_v4.7/configureHomer.pl -install arabidopsis-p
# Worm
$ perl install_path/HOMER_v4.7/configureHomer.pl -install ce6
$ perl install_path/HOMER_v4.7/configureHomer.pl -install ce10
$ perl install_path/HOMER_v4.7/configureHomer.pl -install worm-p



Last edited by nomonma , based on work by admin .
Page last modified on 金曜日 13 of November, 2015 10:25:34 JST.