Platform for Drug Discovery


Bowtie(SE)-MACS2-GADEM-MotIV-ChIPpeakAnno


Introduction


    This pipeline predicts protein binding regions by MACS2 which work well for sharp peak.


    Input1 formatFASTQ (ChIP/case)
    Input2 formatFASTQ (Input/control)
    Library layoutSingle-end
    SpeciesHuman
    Execution timeAbout 5 hours. (30M and 25M reads single-end [36bp])


    For detailed information, please see Bowtie(PE)-MACS2-GADEM-MotIV-ChIPpeakAnno .